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quinlan-lab

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bedqc bedqc Public

BED QC tool (in the making)

HTML 15 1
bedder-rs bedder-rs Public

an API for intersections of genomic data

Rust 74

Repositories

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Showing 10 of 40 repositories

constraint-tools Public
Tools to discover natural selection given multiple evolved DNA sequences (e.g., gnomad cohort, or multiple tumor samples)

quinlan-lab/constraint-tools’s past year of commit activity

Jupyter Notebook 0 MIT 0 8 1 Updated Jan 15, 2025
bedder-rs Public
an API for intersections of genomic data

quinlan-lab/bedder-rs’s past year of commit activity

Rust 74 MIT 0 4 0 Updated Jan 13, 2025
normo-vs-oligo-manuscript Public

quinlan-lab/normo-vs-oligo-manuscript’s past year of commit activity

HTML 0 0 0 0 Updated Sep 13, 2024
applied-computational-genomics Public
Applied Computational Genomics Course at UU: Spring 2020

quinlan-lab/applied-computational-genomics’s past year of commit activity

HTML 956 CC-BY-SA-4.0 212 8 1 Updated Apr 5, 2024
transcriptionary Public

quinlan-lab/transcriptionary’s past year of commit activity

Python 2 MIT 0 0 0 Updated Apr 3, 2024
proj-mutator-mapping Public
Code for reproducing analysis and figures from https://elifesciences.org/reviewed-preprints/89096

quinlan-lab/proj-mutator-mapping’s past year of commit activity

Python 1 MIT 1 0 0 Updated Feb 23, 2024
mutator-epistasis-manuscript Public

quinlan-lab/mutator-epistasis-manuscript’s past year of commit activity

HTML 0 CC-BY-4.0 3 0 1 Updated Oct 25, 2023
Snakemake_Tutorial Public

quinlan-lab/Snakemake_Tutorial’s past year of commit activity

Python 5 1 0 0 Updated Aug 14, 2023
STRling Public
Detect novel (and reference) STR expansions from short-read data

quinlan-lab/STRling’s past year of commit activity

Nim 63 MIT 9 21 (2 issues need help) 1 Updated Aug 7, 2023
CEPH-K1463-TandemRepeats Public Forked from hdashnow/CEPH-K1463-TandemRepeats

quinlan-lab/CEPH-K1463-TandemRepeats’s past year of commit activity

Jupyter Notebook 0 5 0 0 Updated Aug 1, 2023

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