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22 Open 37 Closed
22 Open 37 Closed
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Issues list

import_source currently only supports ensembl_gene_id but not stable_id or other IDs
#160 opened Nov 15, 2024 by Zethson
Add plant genes
#155 opened Nov 13, 2024 by Zethson
@Zethson
Add PO to Tissue new ontology New ontology
#154 opened Nov 13, 2024 by Zethson
@Zethson
No import_from_source for CellMarker
#151 opened Nov 11, 2024 by Zethson
@sunnyosun
import_from_source fails when no parents column is present.
#141 opened Oct 30, 2024 by Zethson
@sunnyosun
import_from_source picks the top currently_used source
#140 opened Oct 30, 2024 by Zethson
@sunnyosun
import_from_source errors for CellLine
#139 opened Oct 30, 2024 by Zethson
@sunnyosun
Better function signature documentation for from_source
#136 opened Oct 23, 2024 by Zethson
Add unique constraints for the combination label, artifact, feature
#132 opened Oct 18, 2024 by falexwolf
Add new Disease source: ordo
#128 opened Oct 14, 2024 by sunnyosun
5
Remove md5 related code
#125 opened Oct 1, 2024 by Zethson
@Zethson
Integrate map_legacy_ids into standardize and improve documentation
#119 opened Sep 19, 2024 by Zethson
1 of 3 tasks
@Zethson
Request to Add 'Normal' Record to bt.Disease
#98 opened Aug 20, 2024 by Kang-chen
@Zethson
8
🧪 Write tests for the admin functions
#79 opened Aug 9, 2024 by sunnyosun
Pronto cannot read ncbitaxon 2024-08-05
#73 opened Aug 8, 2024 by Zethson
✨ An "update" function that updates all ontologies to the new version
#47 opened Jun 17, 2024 by sunnyosun
@sunnyosun
Improve version resolution for ICD
#34 opened Apr 5, 2024 by Zethson
@Zethson
[DO NOT CLOSE] 📝 Guide to add new ontology documentation Improvements or additions to documentation new ontology New ontology
#33 opened Mar 13, 2024 by sunnyosun
Add back support for external DBs in Gene
#40 opened Jul 31, 2023 by sunnyosun
1
1
Add support for more gene and protein sets
#41 opened Jul 25, 2023 by Zethson
1 of 3 tasks
@sunnyosun
Add pathway entity
#43 opened Mar 17, 2023 by Zethson
2 of 6 tasks
@Zethson
✨ Phenotype entity
#44 opened May 30, 2022 by sunnyosun
5 tasks
1
@Zethson
2
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