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@epiverse-trace

Epiverse-TRACE

README.md

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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 43 4

  2. epiparameter epiparameter Public

    R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parameters for infectious diseases

    R 33 11

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 17 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 16 3

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 4

  6. epiCo epiCo Public

    R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

    R 12 1

Repositories

Showing 10 of 59 repositories
  • packagetemplate Public template

    Template of an R package with standard Epiverse-TRACE automation

    epiverse-trace/packagetemplate’s past year of commit activity
    R 7 4 14 (2 issues need help) 3 Updated Jan 18, 2025
  • simulist Public

    An R package for simulating line lists

    epiverse-trace/simulist’s past year of commit activity
    R 8 1 9 0 Updated Jan 17, 2025
  • blueprints Public

    Software development blueprints for epiverse-trace

    epiverse-trace/blueprints’s past year of commit activity
    SCSS 4 4 26 (2 issues need help) 0 Updated Jan 16, 2025
  • epiparameter Public

    R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parameters for infectious diseases

    epiverse-trace/epiparameter’s past year of commit activity
    R 33 11 49 (2 issues need help) 0 Updated Jan 15, 2025
  • epiverse-trace.github.io Public

    Technical blog of the Epiverse-TRACE project, where we share opinions and investigations in R package development, or scientific software development more generally

    epiverse-trace/epiverse-trace.github.io’s past year of commit activity
    R 3 3 11 (1 issue needs help) 4 Updated Jan 15, 2025
  • git-rstudio-basics Public Forked from swcarpentry/git-novice

    Version Control with Git using Rstudio

    epiverse-trace/git-rstudio-basics’s past year of commit activity
    R 1 933 23 0 Updated Jan 14, 2025
  • etstats Public
    epiverse-trace/etstats’s past year of commit activity
    R 1 CC0-1.0 0 2 0 Updated Jan 14, 2025
  • epitkit Public
    epiverse-trace/epitkit’s past year of commit activity
    R 0 2 6 1 Updated Jan 14, 2025
  • tutorials-middle Public
    epiverse-trace/tutorials-middle’s past year of commit activity
    R 3 2 66 (2 issues need help) 2 Updated Jan 14, 2025
  • research-compendium Public
    epiverse-trace/research-compendium’s past year of commit activity
    R 1 0 19 1 Updated Jan 14, 2025
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