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pyproject.toml
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pyproject.toml
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[project]
# This is the name of your project. The first time you publish this
# package, this name will be registered for you. It will determine how
# users can install this project, e.g.:
#
# $ pip install sampleproject
#
# And where it will live on PyPI: https://pypi.org/project/sampleproject/
#
# There are some restrictions on what makes a valid project name
# specification here:
# https://packaging.python.org/specifications/core-metadata/#name
name = "sunbeamlib" # Required
# Versions should comply with PEP 440:
# https://www.python.org/dev/peps/pep-0440/
#
# For a discussion on single-sourcing the version, see
# https://packaging.python.org/guides/single-sourcing-package-version/
#version = "0.0.0" # Required
dynamic = ["version"]
# This is a one-line description or tagline of what your project does. This
# corresponds to the "Summary" metadata field:
# https://packaging.python.org/specifications/core-metadata/#summary
description = "A helper package for running the sunbeam pipeline" # Optional
# This is an optional longer description of your project that represents
# the body of text which users will see when they visit PyPI.
#
# Often, this is the same as your README, so you can just read it in from
# that file directly (as we have already done above)
#
# This field corresponds to the "Description" metadata field:
# https://packaging.python.org/specifications/core-metadata/#description-optional
readme = "README.md" # Optional
# Specify which Python versions you support. In contrast to the
# 'Programming Language' classifiers above, 'pip install' will check this
# and refuse to install the project if the version does not match. See
# https://packaging.python.org/guides/distributing-packages-using-setuptools/#python-requires
requires-python = ">=3.7"
# This is either text indicating the license for the distribution, or a file
# that contains the license
# https://packaging.python.org/en/latest/specifications/core-metadata/#license
# license = {file = "LICENSE.txt"}
# This field adds keywords for your project which will appear on the
# project page. What does your project relate to?
#
# Note that this is a list of additional keywords, separated
# by commas, to be used to assist searching for the distribution in a
# larger catalog.
#keywords = ["bioinformatics", "metagenomics"] # Optional
# This should be your name or the name of the organization who originally
# authored the project, and a valid email address corresponding to the name
# listed.
# authors = [
# {name = "A. Random Developer", email = "[email protected]" } # Optional
# ]
# This should be your name or the names of the organization who currently
# maintains the project, and a valid email address corresponding to the name
# listed.
maintainers = [
{name = "Charlie Bushman", email = "[email protected]" } # Optional
]
# Classifiers help users find your project by categorizing it.
#
# For a list of valid classifiers, see https://pypi.org/classifiers/
classifiers = [ # Optional
# How mature is this project? Common values are
# 3 - Alpha
# 4 - Beta
# 5 - Production/Stable
"Development Status :: 5 - Production/Stable",
# Indicate who your project is intended for
# "Intended Audience :: Developers",
#"Topic :: Bioinformatics",
# Pick your license as you wish
"License :: OSI Approved :: MIT License",
# Specify the Python versions you support here. In particular, ensure
# that you indicate you support Python 3. These classifiers are *not*
# checked by "pip install". See instead "python_requires" below.
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.7",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3 :: Only",
]
# This field lists other packages that your project depends on to run.
# Any package you put here will be installed by pip when your project is
# installed, so they must be valid existing projects.
#
# For an analysis of this field vs pip's requirements files see:
# https://packaging.python.org/discussions/install-requires-vs-requirements/
dependencies = [ # Optional
"more-itertools",
"pyyaml",
]
# List additional groups of dependencies here (e.g. development
# dependencies). Users will be able to install these using the "extras"
# syntax, for example:
#
# $ pip install sampleproject[dev]
#
# Similar to `dependencies` above, these must be valid existing
# projects.
[project.optional-dependencies] # Optional
dev = ["black", "snakefmt"]
test = ["pytest"]
# List URLs that are relevant to your project
#
# This field corresponds to the "Project-URL" and "Home-Page" metadata fields:
# https://packaging.python.org/specifications/core-metadata/#project-url-multiple-use
# https://packaging.python.org/specifications/core-metadata/#home-page-optional
#
# Examples listed include a pattern for specifying where the package tracks
# issues, where the source is hosted, where to say thanks to the package
# maintainers, and where to support the project financially. The key is
# what's used to render the link text on PyPI.
[project.urls] # Optional
"Homepage" = "https://github.com/sunbeam-labs/sunbeam"
"Bug Reports" = "https://github.com/sunbeam-labs/sunbeam/issues"
"Docs" = "https://sunbeam.readthedocs.io/en/stable/"
# "Funding" = "https://donate.pypi.org"
# "Say Thanks!" = "http://saythanks.io/to/example"
"Source" = "https://github.com/sunbeam-labs/sunbeam"
# The following would provide a command line executable called `sample`
# which executes the function `main` from this package when invoked.
[project.scripts] # Optional
sunbeam = "sunbeamlib.script_sunbeam:main"
# This is configuration specific to the `setuptools` build backend.
# If you are using a different build backend, you will need to change this.
[tool.setuptools]
# If there are data files included in your packages that need to be
# installed, specify them here.
#package-data = {"sunbeamlib" = ["*.yml", "*.yaml"]}
[build-system]
# These are the assumed default build requirements from pip:
# https://pip.pypa.io/en/stable/reference/pip/#pep-517-and-518-support
requires = ["setuptools>=61.0.0", "wheel"]
build-backend = "setuptools.build_meta"
[tool.setuptools.dynamic]
version = {attr = "sunbeamlib.__version__"}